Gene: Carub.0001s3945

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s3945
  • Transcript Identifier Carub.0001s3945.1
  • Gene Type Coding gene
  • Location scaffold_1 : 17386867-17389646 : positive

Gene Family Information

  • ID HOM05D000115
  • #Genes/#Species 2905/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s3945.v1.1
  • pacid 39228838
  • synonym Carubv10009861m.g

Descriptions

  • Description K15498 - serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16] (PPP6C)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006470
ISO
PLAZA Integrative Orthologyprotein dephosphorylation AT3G19980
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT3G19980

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
InterProhydrolase activity
GO:0004722
ISO
PLAZA Integrative Orthologyprotein serine/threonine phosphatase activity AT1G50370
GO:0008270
ISO
PLAZA Integrative Orthologyzinc ion binding AT1G50370
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G50370

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G19980
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G19980
GO:0000159
ISO
PLAZA Integrative Orthologyprotein phosphatase type 2A complex AT3G19980

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029052 Metallo-dependent phosphatase-like
IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR004843 Calcineurin-like phosphoesterase domain, ApaH type
Mapman id Description
18.4.25.1.5 Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP6-class phosphatase