Gene: Carub.0001s3676

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s3676
  • Transcript Identifier Carub.0001s3676.1
  • Gene Type Coding gene
  • Location scaffold_1 : 16152974-16153980 : negative

Gene Family Information

  • ID HOM05D000037
  • #Genes/#Species 5045/97
  • Phylogenetic origin
  • ID ORTHO05D114623
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s3676.v1.1
  • pacid 39230862

Descriptions

  • Description 3.2.1.15 - Polygalacturonase / Pectinase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
ISO
PLAZA Homology (enrichment)carbohydrate metabolic process HOM05D000037

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
ISO
PLAZA Homology (enrichment)polygalacturonase activity HOM05D000037

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012334 Pectin lyase fold
IPR011050 Pectin lyase fold/virulence factor
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase