Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0001s3676 Capsella rubella HOM05D000037 ORTHO05D114623 1.7e-85 319.3 164 100.0
AL3G28390 Arabidopsis lyrata HOM05D000037 ORTHO05D000608 5.4e-15 85.1 41 97.6
Carub.0003s1547 Capsella rubella HOM05D000037 ORTHO05D000608 5.4e-15 85.1 41 97.6
CARHR090820 Cardamine hirsuta HOM05D000037 ORTHO05D000608 2.7e-14 82.8 41 92.7
AT3G15720 Arabidopsis thaliana HOM05D000037 ORTHO05D000608 1.7e-13 80.1 41 90.2
Sp3g14060 Schrenkiella parvula HOM05D000037 ORTHO05D000608 3.0e-13 79.3 41 85.4
BcaB06g25683 Brassica carinata HOM05D000037 ORTHO05D000608 5.1e-13 78.6 41 85.4
Thhalv10020740m.g Eutrema salsugineum HOM05D000037 ORTHO05D000608 8.7e-13 77.8 41 80.5
BcaC01g03858 Brassica carinata HOM05D000037 ORTHO05D000608 1.1e-12 77.4 41 82.9
C03p47850 Brassica napus HOM05D000037 ORTHO05D000608 1.1e-12 77.4 41 82.9
BolC3t17062H Brassica oleracea HOM05D000037 ORTHO05D000608 1.1e-12 77.4 41 82.9
BcaC05g28937 Brassica carinata HOM05D000037 ORTHO05D000608 1.5e-12 77.0 41 82.9
A03p39450 Brassica napus HOM05D000037 ORTHO05D000608 1.5e-12 77.0 41 80.5
C05p50660 Brassica napus HOM05D000037 ORTHO05D000608 1.5e-12 77.0 41 82.9
BolC5t33814H Brassica oleracea HOM05D000037 ORTHO05D000608 1.5e-12 77.0 41 82.9
BraA03t13095Z Brassica rapa HOM05D000037 ORTHO05D000608 1.5e-12 77.0 41 80.5
BcaC05g28935 Brassica carinata HOM05D000037 ORTHO05D000608 9.6e-12 74.3 41 80.5
A05p33630 Brassica napus HOM05D000037 ORTHO05D000608 9.6e-12 74.3 41 80.5
A05p33640 Brassica napus HOM05D000037 ORTHO05D000608 9.6e-12 74.3 41 80.5
BolC5t33810H Brassica oleracea HOM05D000037 ORTHO05D000608 9.6e-12 74.3 41 80.5
BraA05t22187Z Brassica rapa HOM05D000037 ORTHO05D000608 9.6e-12 74.3 41 80.5
BraA05t22189Z Brassica rapa HOM05D000037 ORTHO05D000608 9.6e-12 74.3 41 80.5
C05p50640 Brassica napus HOM05D000037 ORTHO05D000608 1.2e-11 73.9 41 80.5
Aa31LG8G2940 Aethionema arabicum HOM05D000037 ORTHO05D000608 3.1e-10 69.3 41 75.6
BcaB06g25675 Brassica carinata HOM05D000209 ORTHO05D000129 4.6e-06 55.5 97 40.2
THA.LOC104818029 Tarenaya hassleriana HOM05D000037 ORTHO05D000608 6.0e-06 55.1 41 53.7


User provided reference genes

Program Settings