Gene: Carub.0001s3290

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s3290
  • Transcript Identifier Carub.0001s3290.1
  • Gene Type Coding gene
  • Location scaffold_1 : 12388840-12391695 : negative

Gene Family Information

  • ID HOM05D000112
  • #Genes/#Species 3032/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s3290.v1.1
  • pacid 39227929
  • synonym Carubv10011321m.g

Descriptions

  • Description PTHR31384:SF1 - AUXIN RESPONSE FACTOR 12-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009725
IEA
InterProresponse to hormone

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G34390

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015300 DNA-binding pseudobarrel domain superfamily
IPR003340 B3 DNA binding domain
IPR044835 Auxin response factor
IPR033389 AUX/IAA domain
IPR010525 Auxin response factor domain
Mapman id Description
15.5.5.1 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (ARF)