Gene: Carub.0001s3197
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0001s3197
- Transcript Identifier Carub.0001s3197.1
- Gene Type Coding gene
- Location scaffold_1 : 11883902-11884899 : positive
Gene Family Information
- ID HOM05D000509
- #Genes/#Species 1053/96
- Phylogenetic origin
- ID ORTHO05D000466
- #Genes/#Species 899/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0001s3197.v1.1
- pacid 39227057
- synonym Carubv10009876m.g
Descriptions
- Description K18801 - glucuronoxylan 4-O-methyltransferase (GXM)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045492 | IEA | InterPro | xylan biosynthetic process | |
| GO:0005976 | ISO | PLAZA Integrative Orthology | polysaccharide metabolic process | AT1G33800 |
| GO:0045491 | ISO | PLAZA Integrative Orthology | xylan metabolic process | AT1G33800 |
| GO:0009808 | ISO | PLAZA Integrative Orthology | lignin metabolic process | AT1G33800 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030775 | ISO | PLAZA Integrative Orthology | glucuronoxylan 4-O-methyltransferase activity | AT1G33800 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT1G33800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.2.2.2.3 | Cell wall organisation.hemicellulose.xylan.modification and degradation.glucuronoxylan 4-O-methyltransferase |