Gene: Carub.0001s3063

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s3063
  • Transcript Identifier Carub.0001s3063.1
  • Gene Type Coding gene
  • Location scaffold_1 : 11336361-11338675 : positive

Gene Family Information

  • ID HOM05D003708
  • #Genes/#Species 185/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s3063.v1.1
  • pacid 39228372
  • synonym Carubv10008967m.g

Descriptions

  • Description K01586 - diaminopimelate decarboxylase (lysA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009089
IEA
InterProlysine biosynthetic process via diaminopimelate

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0008836
IEA
InterProdiaminopimelate decarboxylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G11880
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G11880
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G11880

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal
IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal
IPR029066 PLP-binding barrel
IPR002986 Diaminopimelate decarboxylase, LysA
IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal
IPR000183 Ornithine/DAP/Arg decarboxylase
Mapman id Description
4.1.2.2.3.5 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.diaminopimelate decarboxylase