Gene: Carub.0001s2612

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s2612
  • Transcript Identifier Carub.0001s2612.1
  • Gene Type Coding gene
  • Location scaffold_1 : 9433695-9435510 : negative

Gene Family Information

  • ID HOM05D001631
  • #Genes/#Species 395/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s2612.v1.1
  • pacid 39231527
  • synonym Carubv10009365m.g

Descriptions

  • Description PTHR10896//PTHR10896:SF20 - GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE // GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE I
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045492
ISO
PLAZA Integrative Orthologyxylan biosynthetic process AT1G27600
GO:0010417
ISO
PLAZA Integrative Orthologyglucuronoxylan biosynthetic process AT1G27600
GO:0009834
ISO
PLAZA Integrative Orthologyplant-type secondary cell wall biogenesis AT1G27600
GO:0010584
ISO
PLAZA Integrative Orthologypollen exine formation AT1G27600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015018
IEA
InterProgalactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
GO:0042285
ISO
PLAZA Integrative Orthologyxylosyltransferase activity AT1G27600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G27600
GO:0000139
ISO
PLAZA Integrative OrthologyGolgi membrane Os04g0103100

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029044 Nucleotide-diphospho-sugar transferases
IPR005027 Glycosyl transferase, family 43
Mapman id Description
21.2.2.1.3.1 Cell wall organisation.hemicellulose.xylan.biosynthesis.xylosyltransferase activities.xylosyltransferase (IRX9)