Gene: Carub.0001s0625
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0001s0625
- Transcript Identifier Carub.0001s0625.1
- Gene Type Coding gene
- Location scaffold_1 : 2194357-2195948 : positive
Gene Family Information
- ID HOM05D002411
- #Genes/#Species 281/98
- Phylogenetic origin
- ID ORTHO05D002564
- #Genes/#Species 279/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0001s0625.v1.1
- pacid 39231562
- synonym Carubv10010209m.g
Descriptions
- Description K11094 - U2 small nuclear ribonucleoprotein B'' (SNRPB2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009631 | ISO | PLAZA Integrative Orthology | cold acclimation | AT1G06960 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015030 | ISO | PLAZA Integrative Orthology | Cajal body | AT1G06960 |
| GO:0005686 | ISO | PLAZA Integrative Orthology | U2 snRNP | AT1G06960 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.1.2.2 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).protein factor (U2B) |