Gene: Ca_01348_v3
General Information
Structural Information
- Species Cicer arietinum L.
- Gene Identifier Ca_01348_v3
- Transcript Identifier Ca_01348.1_v3
- Gene Type Coding gene
- Location Ca_LG1_v3 : 13733803-13739152 : negative
Gene Family Information
- ID HOM05D000723
- #Genes/#Species 800/100
- Phylogenetic origin
- ID ORTHO05D001626
- #Genes/#Species 379/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Ca_01348.1_v3
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009644 | ISO | PLAZA Integrative Orthology | response to high light intensity | AT3G55280 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT3G55280 |
| GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT3G55280 |
| GO:0009231 | IEA | InterPro | riboflavin biosynthetic process | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G55280 |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0008686 | IEA | InterPro | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | |
| GO:0003935 | IEA | InterPro | GTP cyclohydrolase II activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT3G55280 |
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT3G55280 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G39460 |
| GO:0015934 | ISO | PLAZA Integrative Orthology | large ribosomal subunit | AT2G39460 |
| GO:0022625 | ISO | PLAZA Integrative Orthology | cytosolic large ribosomal subunit | AT3G55280 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G39460 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT2G39460 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G39460 |
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005633 | Ribosomal protein L23/L25, N-terminal |
| IPR036144 | GTP cyclohydrolase II superfamily |
| IPR019985 | Ribosomal protein L23 |
| IPR032677 | GTP cyclohydrolase II |
| IPR017945 | DHBP synthase RibB-like alpha/beta domain superfamily |
| IPR012678 | Ribosomal protein L23/L15e core domain superfamily |
| IPR000926 | GTP cyclohydrolase II, RibA |
| IPR013025 | Ribosomal protein L25/L23 |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR000422 | 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB |
| Mapman id | Description |
|---|---|
| 17.1.2.1.24 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL23a |