Gene: CSS0050378
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0050378
- Transcript Identifier CSS0050378.1
- Gene Type Coding gene
- Location Chr7 : 4875411-4880845 : positive
Gene Family Information
- ID HOM05D001696
- #Genes/#Species 382/99
- Phylogenetic origin
- ID ORTHO05D001746
- #Genes/#Species 360/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid CSS0050378.1
Descriptions
- Description PREDICTED: uncharacterized protein LOC100267869 isoform X1 [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000290 | IEA | InterPro | deadenylation-dependent decapping of nuclear-transcribed mRNA | |
| GO:0019827 | ISO | PLAZA Integrative Orthology | stem cell population maintenance | AT3G22270 |
| GO:0045087 | ISO | PLAZA Integrative Orthology | innate immune response | AT1G79090 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G22270 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G79090 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G22270 |
| GO:0000932 | ISO | PLAZA Integrative Orthology | P-body | AT1G79090 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT3G22270 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039900 | Pat1-like |
| Mapman id | Description |
|---|---|
| 16.4.2.5 | RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA decay factor (PAT1) |