Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG1G10420 | LG-1 | - | View | |
| Aethionema arabicum | Aa31LG1G28200 | LG-1 | + | View | |
| Acer truncatum | Atru.chr5.787 | chr5 | + | View | |
| Arabidopsis lyrata | AL1G11460 | scaffold_1 | + | View | |
| Arabidopsis lyrata | AL4G46300 | scaffold_4 | + | View | |
| Amaranthus hybridus | Ah.05g178860 | Protein LHY (MYB-related transcription factor LHY) (Protein LATE ELONGATED HYPOCOTYL) | AmaHy_arrow1_Scaffold_5 | - | View |
| Aquilegia oxysepala | Aqoxy7G00001_Aqoxy7G00002 | CHR07 | + | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.GF54Z4 | K12133 - MYB-related transcription factor LHY (LHY) | arahy.Tifrunner.gnm1.Arahy.16 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.P5534Y | K12133 - MYB-related transcription factor LHY (LHY) | arahy.Tifrunner.gnm1.Arahy.06 | - | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.0U0SSW | K12133 - MYB-related transcription factor LHY (LHY) | arahy.Tifrunner.gnm1.Arahy.02 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.J7VJ5I | K12133 - MYB-related transcription factor LHY (LHY) | arahy.Tifrunner.gnm1.Arahy.12 | + | View |
| Arabidopsis thaliana | AT2G46830 | circadian clock associated 1 Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis. circadian clock associated 1 (CCA1)%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb-like DNA-binding domain%2C SHAQKYF class (InterPro:IPR006447)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%3B BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G01060.3)%3B Has 3942 Blast hits to 2101 proteins in 266 species: Archae - 5%3B Bacteria - 79%3B Metazoa - 414%3B Fungi - 218%3B Plants - 1144%3B Viruses - 7%3B Other Eukaryotes - 2075 (source: NCBI BLink). | Chr2 | + | View |
| Arabidopsis thaliana | AT1G01060 | Homeodomain-like superfamily protein LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1 LATE ELONGATED HYPOCOTYL (LHY)%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Myb-like DNA-binding domain%2C SHAQKYF class (InterPro:IPR006447)%3B BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1)%3B Has 2469 Blast hits to 2022 proteins in 280 species: Archae - 2%3B Bacteria - 257%3B Metazoa - 292%3B Fungi - 162%3B Plants - 1048%3B Viruses - 29%3B Other Eukaryotes - 679 (source: NCBI BLink). | Chr1 | - | View |
| Brassica carinata | BcaC02g12626 | ChrC02 | + | View | |
| Brassica napus | C05p00880 | C05 | + | View | |
| Beta vulgaris | EL10Ac1g00171 | K12133 - MYB-related transcription factor LHY (LHY) | Chr1_EL10_PGA_scaffold3 | - | View |
| Cicer arietinum L. | Ca_09556_v3 | Ca_LG3_v3 | + | View | |
| Corylus avellana | Haze_15754 | Similar to LHY: Protein LHY (Arabidopsis thaliana OX%3D3702) | 11 | + | View |
| Coffea canephora | Cc02_g39990 | Putative Protein LHY | chr2 | + | View |
| Citrus clementina | Ciclev10018964m.g | scaffold_3 | - | View | |
| Ceratophyllum demersum | CDE04G0747 | 2 | + | View | |
| Carpinus fangiana | Cfa003724 | Cfa01 | - | View | |
| Cardamine hirsuta | CARHR001420 | MYB transcription factor | Chr1 | + | View |
| Cardamine hirsuta | CARHR142170 | MYB transcription factor | Chr4 | + | View |
| Carya illinoinensis | CiPaw.02G045300 | K12133 - MYB-related transcription factor LHY (LHY) | Chr02 | + | View |
| Carya illinoinensis | CiPaw.01G085700 | K12133 - MYB-related transcription factor LHY (LHY) | Chr01 | + | View |
| Corchorus olitorius | COL.COLO4_23060 | hypothetical protein | AWUE01018151.1 | + | View |
| Carica papaya | Cpa.g.sc57.78 | supercontig_57 | - | View | |
| Chenopodium quinoa | AUR62004570 | LHY: Protein LHY | C_Quinoa_Scaffold_4250 | + | View |
| Chenopodium quinoa | AUR62022683 | LHY: Protein LHY | C_Quinoa_Scaffold_1870 | + | View |
| Capsella rubella | Carub.0004s2954 | K12134 - circadian clock associated 1 (CCA1) | scaffold_4 | + | View |
| Davidia involucrata | Dinv34262 | GWHABJS00000016 | + | View | |
| Davidia involucrata | Dinv32651 | GWHABJS00000020 | + | View | |
| Durio zibethinus | Duzib138G1188 | NW_019167893.1 | + | View | |
| Durio zibethinus | Duzib133G0065 | NW_019167938.1 | + | View | |
| Eucalyptus grandis | Eucgr.D02651 | Chr04 | + | View | |
| Fragaria x ananassa | FAN06G1969 | K12133 - MYB-related transcription factor LHY (LHY) | Fvb7-2 | + | View |
| Fragaria x ananassa | FAN10G0258 | K12133 - MYB-related transcription factor LHY (LHY) | Fvb7-1 | + | View |
| Fragaria x ananassa | FAN06G3608 | K12133 - MYB-related transcription factor LHY (LHY) | Fvb7-2 | + | View |
| Fragaria x ananassa | FAN10G4260 | PTHR12802:SF43 - PROTEIN CCA1-RELATED | Fvb7-1 | + | View |
| Fragaria x ananassa | FAN03G0514 | K12133 - MYB-related transcription factor LHY (LHY) | Fvb7-3 | - | View |
| Fragaria vesca | FvH4_7g17850 | K12133 - MYB-related transcription factor LHY (LHY) | Fvb7 | + | View |
| Gossypium hirsutum | Gohir.A12G117400 | PTHR12802//PTHR12802:SF43 - SWI/SNF COMPLEX-RELATED // PROTEIN CCA1-RELATED | A12 | - | View |
| Gossypium hirsutum | Gohir.D12G121000 | PTHR12802//PTHR12802:SF43 - SWI/SNF COMPLEX-RELATED // PROTEIN CCA1-RELATED | D12 | - | View |
| Glycine max | Glyma.07G048500 | K12133 - MYB-related transcription factor LHY (LHY) | Gm07 | - | View |
| Glycine max | Glyma.19G260900 | K12133 - MYB-related transcription factor LHY (LHY) | Gm19 | + | View |
| Glycine max | Glyma.16G017400 | K12133 - MYB-related transcription factor LHY (LHY) | Gm16 | - | View |
| Glycine max | Glyma.03G261800 | K12133 - MYB-related transcription factor LHY (LHY) | Gm03 | + | View |
| Gossypium raimondii | Gorai.007G113900 | Chr07 | + | View | |
| Gossypium raimondii | Gorai.008G131800 | Chr08 | - | View | |
| Lupinus albus | Lalb_Chr15g0076591 | K12133 - MYB-related transcription factor LHY (LHY) | Lalb_Chr15 | + | View |
| Lupinus albus | Lalb_Chr10g0100921 | K12133 - MYB-related transcription factor LHY (LHY) | Lalb_Chr10 | + | View |
| Lotus japonicus | Lj3g0020484 | K12133 - MYB-related transcription factor LHY (LHY) | chr3 | - | View |
| Lonicera japonica | Lj9C609G5 | GWHAAZE00000009 | + | View | |
| Manihot esculenta | Manes.01G239000 | Chromosome01 | - | View | |
| Manihot esculenta | Manes.05G015600 | Chromosome05 | - | View | |
| Medicago truncatula | Medtr7g118330 | late elongated hypocotyl-like protein | chr7 | + | View |
| Punica granatum | PGR031G0915 | NC_045127.1 | - | View | |
| Prunus persica | Prupe.2G200300 | Pp02 | - | View | |
| Pisum sativum | Psat3g000720 | Myb-like DNA-binding domain | chr3LG5 | - | View |
| Populus trichocarpa | Potri.014G106800 | K12133 - MYB-related transcription factor LHY (LHY) | Chr14 | + | View |
| Populus trichocarpa | Potri.002G180800 | K12133 - MYB-related transcription factor LHY (LHY) | Chr02 | + | View |
| Phaseolus vulgaris | Phvul.009G259400 | K12133 - MYB-related transcription factor LHY (LHY) | Chr09 | + | View |
| Phaseolus vulgaris | Phvul.010G120401 | Chr10 | + | View | |
| Quercus lobata | QL08p047700 | 8 | + | View | |
| Rosa chinensis | RcHm_v2.0_Chr1g0361301 | RcHm_v2.0_Chr1 | + | View | |
| Salvia bowleyana | SalBow5G5002 | GWHASIU00000003 | + | View | |
| Salix brachista | Sabra14G0079000 | GWHAAZH00000014 | + | View | |
| Salix brachista | Sabra02G0133600 | GWHAAZH00000002 | - | View | |
| Sechium edule | Sed0026128 | LG09 | + | View | |
| Schrenkiella parvula | Sp4g28860 | K12134 - circadian clock associated 1 (CCA1) | ch4-6 | + | View |
| Selenicereus undatus | Hund27142 | Scaffold_2055 | - | View | |
| Selenicereus undatus | Hund16759 | Scaffold_33675 | + | View | |
| Trochodendron aralioides | TAR375G0744 | group15 | + | View | |
| Trochodendron aralioides | TAR374G0209 | group12 | + | View | |
| Trochodendron aralioides | TAR629G3201 | group0 | + | View | |
| Theobroma cacao | Thecc.01G332000 | Homeodomain-like superfamily protein | Chromosome_1 | - | View |
| Tarenaya hassleriana | THA.LOC104803067 | protein CCA1 | NW_010970490.1 | + | View |
| Tarenaya hassleriana | THA.LOC104825910 | protein LHY-like isoform X1 | NW_010967707.1 | + | View |
| Tarenaya hassleriana | THA.LOC104827645 | protein CCA1-like isoform X1 | NW_010967884.1 | + | View |
| Trifolium pratense | TPR.G4678 | Tp57577_TGAC_v2_LG6 | - | View | |
| Tripterygium wilfordii | TWI23G1207 | NC_052239.1 | - | View | |
| Tripterygium wilfordii | TWI14G1269 | NC_052249.1 | + | View | |
| Vaccinium macrocarpon | vmacro12635 | Similar to CCA1: Protein CCA1 (Arabidopsis thaliana OX%3D3702) | chr11_Vaccinium_macrocarpon_Stevens_v1 | + | View |
| Vigna mungo | VMungo1309G2431 | CM024072.1 | - | View | |
| Vigna mungo | VMungo0331G1277 | CM024078.1 | - | View | |
| Vitis vinifera | GSVIVG01027456001 | chr15 | - | View |