Gene: CSS0025871
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0025871
- Transcript Identifier CSS0025871.1
- Gene Type Coding gene
- Location Chr11 : 86079792-86084833 : negative
Gene Family Information
- ID HOM05D000627
- #Genes/#Species 910/97
- Phylogenetic origin
- ID ORTHO05D000365
- #Genes/#Species 1053/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid CSS0025871.1
Descriptions
- Description Phytochrome interacting factor 3-like 5, putative isoform 3 [Theobroma cacao]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010928 | ISO | PLAZA Integrative Orthology | regulation of auxin mediated signaling pathway | AT3G59060 |
| GO:0090229 | ISO | PLAZA Integrative Orthology | negative regulation of red or far-red light signaling pathway | Os03g0782500 |
| GO:0010244 | ISO | PLAZA Integrative Orthology | response to low fluence blue light stimulus by blue low-fluence system | AT3G59060 |
| GO:0010017 | ISO | PLAZA Integrative Orthology | red or far-red light signaling pathway | AT2G43010 |
| GO:0010600 | ISO | PLAZA Integrative Orthology | regulation of auxin biosynthetic process | AT3G59060 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | Os03g0782500 |
| GO:0009638 | ISO | PLAZA Integrative Orthology | phototropism | AT2G43010 |
| GO:0009704 | ISO | PLAZA Integrative Orthology | de-etiolation | AT2G43010 |
| GO:0080006 | ISO | PLAZA Integrative Orthology | internode patterning | Os03g0782500 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | Os03g0782500 |
| GO:0010161 | ISO | PLAZA Integrative Orthology | red light signaling pathway | AT2G43010 |
| GO:0009693 | ISO | PLAZA Integrative Orthology | ethylene biosynthetic process | AT3G59060 |
| GO:0009585 | ISO | PLAZA Integrative Orthology | red, far-red light phototransduction | AT3G59060 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1990841 | ISO | PLAZA Integrative Orthology | promoter-specific chromatin binding | AT3G59060 |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G59060 |
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT2G43010 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G59060 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |