Gene: CSS0014709
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0014709
- Transcript Identifier CSS0014709.1
- Gene Type Coding gene
- Location Chr11 : 43535806-43545144 : negative
Gene Family Information
- ID HOM05D001141
- #Genes/#Species 542/100
- Phylogenetic origin
- ID ORTHO05D001088
- #Genes/#Species 493/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CSS0014709.1
Descriptions
- Description PREDICTED: histone deacetylase 9-like [Fragaria vesca subsp. vesca]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016575 | IEA | InterPro | histone deacetylation | |
GO:0010187 | ISO | PLAZA Integrative Orthology | negative regulation of seed germination | AT3G44680 |
GO:1900055 | ISO | PLAZA Integrative Orthology | regulation of leaf senescence | AT3G44680 |
GO:1990619 | ISO | PLAZA Integrative Orthology | histone H3-K9 deacetylation | AT3G44680 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004407 | IEA | InterPro | histone deacetylase activity | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G44680 |
GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT3G44680 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G44680 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G44680 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G44680 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
12.3.2.1.1.1.1 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.HDA9-PWR deacetylation complex.deacetylase component HDA9 |
12.3.2.1.1.3 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.histone deacetylase (HDA8) |