Gene: CSS0013491
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0013491
- Transcript Identifier CSS0013491.2
- Gene Type Coding gene
- Location Contig1196 : 457242-464834 : negative
Gene Family Information
- ID HOM05D000329
- #Genes/#Species 1418/100
- Phylogenetic origin
- ID ORTHO05D000833
- #Genes/#Species 589/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CSS0013491.2
Descriptions
- Description PREDICTED: lysine-specific demethylase JMJ18 isoform X1 [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0010216 | ISO | PLAZA Integrative Orthology | maintenance of DNA methylation | AT4G20400 |
GO:0034720 | ISO | PLAZA Integrative Orthology | histone H3-K4 demethylation | AT4G20400 |
GO:0016571 | ISO | PLAZA Integrative Orthology | histone methylation | AT4G20400 |
GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT4G20400 |
GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT2G34880 |
GO:0048573 | ISO | PLAZA Integrative Orthology | photoperiodism, flowering | AT4G20400 |
GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT4G20400 |
GO:0048579 | ISO | PLAZA Integrative Orthology | negative regulation of long-day photoperiodism, flowering | AT4G20400 |
GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT2G34880 |
GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT2G34880 |
GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT2G34880 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G20400 |
GO:0034647 | ISO | PLAZA Integrative Orthology | histone demethylase activity (H3-trimethyl-K4 specific) | AT2G34880 |
GO:0032453 | ISO | PLAZA Integrative Orthology | histone demethylase activity (H3-K4 specific) | AT4G20400 |
GO:0042054 | ISO | PLAZA Integrative Orthology | histone methyltransferase activity | AT4G20400 |
GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT4G20400 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | InterPro | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
12.3.3.8.4 | Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM7) |