Gene: CSS0005232
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0005232
- Transcript Identifier CSS0005232.1
- Gene Type Coding gene
- Location Contig514 : 656025-670664 : negative
Gene Family Information
- ID HOM05D003015
- #Genes/#Species 229/96
- Phylogenetic origin
- ID ORTHO05D003733
- #Genes/#Species 207/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CSS0005232.1
Descriptions
- Description PREDICTED: zinc finger CCCH domain-containing protein 40-like [Pyrus x bretschneideri]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004088 | K Homology domain, type 1 |
| IPR000571 | Zinc finger, CCCH-type |
| IPR036612 | K Homology domain, type 1 superfamily |
| IPR036855 | Zinc finger, CCCH-type superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR004087 | K Homology domain |
| IPR035979 | RNA-binding domain superfamily |
| IPR039171 | Pre-mRNA-splicing factor Cwc2/Slt11 |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Mapman id | Description |
|---|---|
| 15.5.16 | RNA biosynthesis.transcriptional regulation.transcription factor (C3H-ZF) |
| 16.2.5.2.1 | RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component MAC5 |