Gene: COL.COLO4_34926

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_34926
  • Transcript Identifier COL.rna33616
  • Gene Type Coding gene
  • Location AWUE01022462.1 : 104079-105152 : positive

Gene Family Information

  • ID HOM05D000123
  • #Genes/#Species 2785/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna33616
  • GenBank OMO58037.1
  • id gene34898
  • gene_name COLO4_34926
  • uniprot A0A1R3GIZ9

Descriptions

  • Description Heat shock factor (HSF)-type, DNA-binding protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid Os01g0733200
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress Os01g0733200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G24520

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR000232 Heat shock factor (HSF)-type, DNA-binding
IPR027725 Heat shock transcription factor family
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
15.5.13 RNA biosynthesis.transcriptional regulation.transcription factor (HSF)