Gene: COL.COLO4_34572
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_34572
- Transcript Identifier COL.rna33263
- Gene Type Coding gene
- Location AWUE01022413.1 : 43948-47320 : negative
Gene Family Information
- ID HOM05D001895
- #Genes/#Species 348/99
- Phylogenetic origin
- ID ORTHO05D002082
- #Genes/#Species 319/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna33263
- GenBank OMO58506.1
- id gene34544
- gene_name COLO4_34572
- uniprot A0A1R3GKA4
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005976 | ISO | PLAZA Integrative Orthology | polysaccharide metabolic process | AT3G06550 |
| GO:0045492 | ISO | PLAZA Integrative Orthology | xylan biosynthetic process | AT3G06550 |
| GO:0045491 | ISO | PLAZA Integrative Orthology | xylan metabolic process | AT3G06550 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT3G06550 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT3G06550 |
| GO:1990937 | ISO | PLAZA Integrative Orthology | xylan acetylation | AT3G06550 |
| GO:0009834 | ISO | PLAZA Integrative Orthology | plant-type secondary cell wall biogenesis | AT3G06550 |
| GO:0010411 | ISO | PLAZA Integrative Orthology | xyloglucan metabolic process | AT3G06550 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT3G06550 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT3G06550 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012419 | Cas1p 10 TM acyl transferase domain |
| Mapman id | Description |
|---|---|
| 21.2.2.2.1 | Cell wall organisation.hemicellulose.xylan.modification and degradation.O-acetyltransferase (RWA) |