Gene: COL.COLO4_31850

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_31850
  • Transcript Identifier COL.rna30564
  • Gene Type Coding gene
  • Location AWUE01020877.1 : 28192-32539 : negative

Gene Family Information

  • ID HOM05D000684
  • #Genes/#Species 835/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna30564
  • GenBank OMO64748.1
  • id gene31822
  • gene_name COLO4_31850
  • uniprot A0A1R3H301

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0009640
ISO
PLAZA Homology (enrichment)photomorphogenesis HOM05D000684
GO:0010218
ISO
PLAZA Integrative Orthologyresponse to far red light AT5G52250
GO:0043254
ISO
PLAZA Integrative Orthologyregulation of protein-containing complex assembly AT5G52250
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT5G52250
GO:0010114
ISO
PLAZA Integrative Orthologyresponse to red light AT5G52250

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IEA
GOA Databaseubiquitin protein ligase activity
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
IPR042755 E3 ubiquitin-protein ligase COP1
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
19.2.2.8.3.4.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.substrate adaptor activities.COP1-SPA substrate adaptor subcomplex.component COP1
26.1.1.3.1 External stimuli response.light.red/far red light.substrate adaptor module of CUL4-DDB1 ubiquitin ligase complex.component COP1