Gene: COL.COLO4_31740

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_31740
  • Transcript Identifier COL.rna30454
  • Gene Type Coding gene
  • Location AWUE01020870.1 : 28011-44181 : positive

Gene Family Information

  • ID HOM05D000226
  • #Genes/#Species 1818/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna30454
  • GenBank OMO64892.1
  • id gene31712
  • gene_name COLO4_31740
  • uniprot A0A1R3H3G8

Descriptions

  • Description PAK-box/P21-Rho-binding protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048825
ISO
PLAZA Integrative Orthologycotyledon development AT4G04890
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT4G04890
GO:0090627
ISO
PLAZA Integrative Orthologyplant epidermal cell differentiation AT4G21750
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis AT1G05230
GO:2000033
ISO
PLAZA Integrative Orthologyregulation of seed dormancy process AT4G04890
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT4G04890
GO:0048497
ISO
PLAZA Integrative Orthologymaintenance of floral organ identity AT4G04890
GO:0009913
ISO
PLAZA Integrative Orthologyepidermal cell differentiation AT4G04890
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0010215
IEA
GOA Databasecellulose microfibril organization
GO:0010215
IEA
InterProcellulose microfibril organization
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008289
IEA
GOA Databaselipid binding
GO:0008289
IEA
InterProlipid binding
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT4G21750
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G04890
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G04890
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000981
IEA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031225
IEA
GOA Databaseanchored component of membrane
GO:0031225
IEA
InterProanchored component of membrane
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000095 CRIB domain
IPR001356 Homeobox domain
IPR006918 COBRA, plant
IPR002913 START domain
IPR042160 Homeobox-leucine zipper protein GLABRA2/ANL2/PDF2/ATML1-like
IPR023393 START-like domain superfamily
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.3.3 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP IV)
21.1.2.2 Cell wall organisation.cellulose.cellulose-hemicellulose network assembly.regulatory protein (COB)
27.4.5.2 Multi-process regulation.Rop-GTPase regulatory system.ROP GTPase effector activities.GTPase effector (RIC)