Gene: COL.COLO4_31295

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_31295
  • Transcript Identifier COL.rna30010
  • Gene Type Coding gene
  • Location AWUE01020836.1 : 25151-30650 : positive

Gene Family Information

  • ID HOM05D001720
  • #Genes/#Species 376/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna30010
  • GenBank OMO65377.1
  • id gene31267
  • gene_name COLO4_31295
  • uniprot A0A1R3H4W5

Descriptions

  • Description protein SCAR3-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030036
IEA
GOA Databaseactin cytoskeleton organization
GO:0030036
IEA
InterProactin cytoskeleton organization
GO:0051127
ISO
PLAZA Integrative Orthologypositive regulation of actin nucleation AT2G34150

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003779
IEA
GOA Databaseactin binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G34150
GO:0003785
ISO
PLAZA Integrative Orthologyactin monomer binding AT2G34150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005856
IEA
InterProcytoskeleton
GO:0005737
IEA
GOA Databasecytoplasm
GO:0043229
ISO
PLAZA Integrative Orthologyintracellular organelle AT2G34150
GO:0031209
ISO
PLAZA Integrative OrthologySCAR complex AT2G34150
GO:0016020
ISO
PLAZA Integrative Orthologymembrane AT2G34150
GO:0071944
ISO
PLAZA Integrative Orthologycell periphery AT2G34150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028288 SCAR/WAVE family
Mapman id Description
20.2.2.2.4 Cytoskeleton organisation.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.component SCAR