Gene: COL.COLO4_30942

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_30942
  • Transcript Identifier COL.rna29657
  • Gene Type Coding gene
  • Location AWUE01020800.1 : 31034-33013 : positive

Gene Family Information

  • ID HOM05D000064
  • #Genes/#Species 3993/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna29657
  • GenBank OMO65888.1
  • id gene30914
  • gene_name COLO4_30942
  • uniprot A0A1R3H695

Descriptions

  • Description Small GTPase superfamily
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
ISO
PLAZA Integrative Orthologyintracellular protein transport AT4G19640
GO:0010256
ISO
PLAZA Integrative Orthologyendomembrane system organization Os12g0631100
GO:0051028
ISO
PLAZA Integrative OrthologymRNA transport Os12g0631100
GO:0007034
ISO
PLAZA Integrative Orthologyvacuolar transport AT5G45130
GO:0045324
ISO
PLAZA Integrative Orthologylate endosome to vacuole transport AT4G19640
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT4G19640

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G19640
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032586
ISO
PLAZA Integrative Orthologyprotein storage vacuole membrane Os12g0631100
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G19640
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT4G19640
GO:0009705
ISO
PLAZA Integrative Orthologyplant-type vacuole membrane Os12g0631100
GO:0005769
ISO
PLAZA Integrative Orthologyearly endosome AT4G19640
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G19640
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G45130
GO:0000139
ISO
PLAZA Integrative OrthologyGolgi membrane Os12g0631100
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT4G19640
GO:0043229
ISO
PLAZA Integrative Orthologyintracellular organelle AT4G19640

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005225 Small GTP-binding protein domain
IPR001806 Small GTPase
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
22.3.4.1.6 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.F-class RAB GTPase
22.3.4.5.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB5-RAB7-dependent pathway.small GTPase (RAB5)