Gene: COL.COLO4_30870

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_30870
  • Transcript Identifier COL.rna29585
  • Gene Type Coding gene
  • Location AWUE01020791.1 : 144074-147537 : negative

Gene Family Information

  • ID HOM05D000036
  • #Genes/#Species 5053/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna29585
  • GenBank OMO66007.1
  • id gene30842
  • gene_name COLO4_30870
  • uniprot A0A1R3H6M7

Descriptions

  • Description Pectinesterase, catalytic
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
GOA Databasecell wall modification
GO:0042545
IEA
InterProcell wall modification
GO:1990110
ISO
PLAZA Integrative Orthologycallus formation AT1G53830
GO:0009624
ISO
PLAZA Integrative Orthologyresponse to nematode AT3G14310
GO:0009620
ISO
PLAZA Integrative Orthologyresponse to fungus AT3G14310
GO:0050829
ISO
PLAZA Integrative Orthologydefense response to Gram-negative bacterium AT3G14310
GO:0045490
IEA
GOA Databasepectin catabolic process
GO:0043086
IEA
GOA Databasenegative regulation of catalytic activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G14310
GO:0030599
IEA
GOA Databasepectinesterase activity
GO:0030599
IEA
InterPropectinesterase activity
GO:0004857
IEA
GOA Databaseenzyme inhibitor activity
GO:0004857
IEA
InterProenzyme inhibitor activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0045330
IEA
GOA Databaseaspartyl esterase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G14310
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT1G53830
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT3G14310
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT3G14310
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G14310
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012334 Pectin lyase fold
IPR006501 Pectinesterase inhibitor domain
IPR035513 Invertase/pectin methylesterase inhibitor domain superfamily
IPR011050 Pectin lyase fold/virulence factor
IPR000070 Pectinesterase, catalytic
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase