Gene: COL.COLO4_29496

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_29496
  • Transcript Identifier COL.rna28213
  • Gene Type Coding gene
  • Location AWUE01020368.1 : 37027-43525 : positive

Gene Family Information

  • ID HOM05D000435
  • #Genes/#Species 1184/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna28213
  • GenBank OMO68667.1
  • id gene29468
  • gene_name COLO4_29496
  • uniprot A0A1R3HE94

Descriptions

  • Description ABC transporter-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0010148
ISO
PLAZA Integrative Orthologytranspiration AT5G06530
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G06530

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0140359
IEA
GOA DatabaseABC-type transporter activity
GO:0140359
IEA
InterProABC-type transporter activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G06530

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR013525 ABC-2 type transporter
IPR003593 AAA+ ATPase domain
IPR003439 ABC transporter-like, ATP-binding domain
IPR043926 ABC transporter family G domain
Mapman id Description
24.1.3.2.2 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter