Gene: COL.COLO4_29327

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_29327
  • Transcript Identifier COL.rna28044
  • Gene Type Coding gene
  • Location AWUE01020322.1 : 18945-20951 : negative

Gene Family Information

  • ID HOM05D000125
  • #Genes/#Species 2751/82
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna28044
  • GenBank OMO68948.1
  • id gene29299
  • gene_name COLO4_29327
  • uniprot A0A1R3HFB3

Descriptions

  • Description Zinc finger, PHD-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035556
IEA
GOA Databaseintracellular signal transduction
GO:0035556
IEA
InterProintracellular signal transduction
GO:0009411
ISO
PLAZA Integrative Orthologyresponse to UV AT5G59920
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT3G27490
GO:2000033
ISO
PLAZA Integrative Orthologyregulation of seed dormancy process AT3G27490
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT4G01350
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT5G59920

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G27490
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT3G27490

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G27490
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G59920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002219 Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR001965 Zinc finger, PHD-type
IPR004146 DC1
Mapman id Description
35.1 not assigned.annotated