Gene: COL.COLO4_28680

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_28680
  • Transcript Identifier COL.rna27398
  • Gene Type Coding gene
  • Location AWUE01020023.1 : 63417-65494 : positive

Gene Family Information

  • ID HOM05D000752
  • #Genes/#Species 778/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna27398
  • GenBank OMO70230.1
  • id gene28652
  • gene_name COLO4_28680
  • uniprot A0A1R3HIS7

Descriptions

  • Description Zinc finger, C2H2-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0010468
IEA
GOA Databaseregulation of gene expression
GO:0010468
IEA
InterProregulation of gene expression
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G13290
GO:1990058
ISO
PLAZA Integrative Orthologyfruit replum development AT3G57670
GO:0010087
ISO
PLAZA Integrative Orthologyphloem or xylem histogenesis AT1G13290
GO:0009860
ISO
PLAZA Integrative Orthologypollen tube growth AT3G57670
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT1G13290
GO:0080022
ISO
PLAZA Integrative Orthologyprimary root development AT3G57670
GO:0010588
ISO
PLAZA Integrative Orthologycotyledon vascular tissue pattern formation AT1G13290
GO:0010500
ISO
PLAZA Integrative Orthologytransmitting tissue development AT3G57670
GO:0010305
ISO
PLAZA Integrative Orthologyleaf vascular tissue pattern formation AT1G13290
GO:0001709
ISO
PLAZA Integrative Orthologycell fate determination AT3G57670

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR043584 Zinc finger protein WIP
IPR013087 Zinc finger C2H2-type
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)