Gene: AT1G13290

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G13290
  • Transcript Identifier AT1G13290.1
  • Gene Type Coding gene
  • Location Chr1 : 4550366-4551527 : negative

Gene Family Information

  • ID HOM05D000752
  • #Genes/#Species 778/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G13290.1
  • symbol DOT5
  • Alias WIP6,WIP domain protein 6
  • full_name DEFECTIVELY ORGANIZED TRIBUTARIES 5
  • uniprot Q9FX68

Descriptions

  • Description C2H2-like zinc finger protein
  • Computational description DEFECTIVELY ORGANIZED TRIBUTARIES 5 (DOT5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G57670.1); Has 7460 Blast hits to 6100 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 6553; Fungi - 59; Plants - 690; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010468
IEA
GOA Databaseregulation of gene expression
GO:0010468
IBA
Gene Ontologyregulation of gene expression1
GO:0010468
IEA
InterProregulation of gene expression
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0048856
IBA
Gene Ontologyanatomical structure development1
GO:0048367
IMP
Gene Ontologyshoot system development2
GO:0048364
IMP
Gene Ontologyroot development2
GO:0010588
IMP
Gene Ontologycotyledon vascular tissue pattern formation2
GO:0010305
IMP
Gene Ontologyleaf vascular tissue pattern formation2
GO:0010087
IMP
Gene Ontologyphloem or xylem histogenesis2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity3
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus1 4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043584 Zinc finger protein WIP
IPR036236 Zinc finger C2H2 superfamily
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)