Gene: COL.COLO4_26691
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_26691
- Transcript Identifier COL.rna25420
- Gene Type Coding gene
- Location AWUE01019360.1 : 4015-13045 : positive
Gene Family Information
- ID HOM05D003140
- #Genes/#Species 218/98
- Phylogenetic origin
- ID ORTHO05D003851
- #Genes/#Species 202/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna25420
- GenBank OMO74149.1
- id gene26663
- gene_name COLO4_26691
- uniprot A0A1R3HUS9
Descriptions
- Description Disease resistance protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006952 | IEA | GOA Database | defense response | |
| GO:0006952 | IEA | InterPro | defense response | |
| GO:0022900 | ISO | PLAZA Integrative Orthology | electron transport chain | AT4G05450 |
| GO:0048868 | ISO | PLAZA Integrative Orthology | pollen tube development | AT4G05450 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051536 | IEA | GOA Database | iron-sulfur cluster binding | |
| GO:0051536 | IEA | InterPro | iron-sulfur cluster binding | |
| GO:0043531 | IEA | GOA Database | ADP binding | |
| GO:0043531 | IEA | InterPro | ADP binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G05450 |
| GO:0009055 | ISO | PLAZA Homology (enrichment) | electron transfer activity | HOM05D003140 |
| GO:0051537 | ISO | PLAZA Homology (enrichment) | 2 iron, 2 sulfur cluster binding | HOM05D003140 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT4G05450 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR042197 | Apoptotic protease-activating factors, helical domain |
| IPR044974 | Disease resistance protein, plants |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR036010 | 2Fe-2S ferredoxin-like superfamily |
| IPR032675 | Leucine-rich repeat domain superfamily |
| IPR002182 | NB-ARC |
| IPR012675 | Beta-grasp domain superfamily |
| Mapman id | Description |
|---|---|
| 7.11.2.1.5 | Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.assembly phase.adrenodoxin |