Gene: COL.COLO4_26480

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_26480
  • Transcript Identifier COL.rna25210
  • Gene Type Coding gene
  • Location AWUE01019241.1 : 41818-47464 : positive

Gene Family Information

  • ID HOM05D001625
  • #Genes/#Species 397/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna25210
  • GenBank OMO74832.1
  • id gene26452
  • gene_name COLO4_26480
  • uniprot A0A1R3HWV0

Descriptions

  • Description NAD-dependent epimerase/dehydratase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016487
ISO
PLAZA Integrative Orthologyfarnesol metabolic process AT4G33360
GO:0009788
ISO
PLAZA Integrative Orthologynegative regulation of abscisic acid-activated signaling pathway AT4G33360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0047886
ISO
PLAZA Integrative Orthologyfarnesol dehydrogenase activity AT4G33360

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT4G33360
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT4G33360
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G33360
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G33360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008547 Protein of unknown function DUF829, TMEM53
IPR029058 Alpha/Beta hydrolase fold
IPR001509 NAD-dependent epimerase/dehydratase
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
50.1.1 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor