Gene: COL.COLO4_25917

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_25917
  • Transcript Identifier COL.rna24648
  • Gene Type Coding gene
  • Location AWUE01019186.1 : 29833-31402 : negative

Gene Family Information

  • ID HOM05D000726
  • #Genes/#Species 800/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna24648
  • GenBank OMO75715.1
  • id gene25889
  • gene_name COLO4_25917
  • uniprot A0A1R3HZE4

Descriptions

  • Description Small GTPase superfamily
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
ISO
PLAZA Integrative Orthologyintracellular protein transport AT3G18820
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT1G49300
GO:0045324
ISO
PLAZA Integrative Orthologylate endosome to vacuole transport AT3G18820
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT3G18820
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT1G49300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G18820
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010008
ISO
PLAZA Integrative Orthologyendosome membrane AT3G18820
GO:0009705
ISO
PLAZA Integrative Orthologyplant-type vacuole membrane AT3G18820
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G18820
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT3G18820
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G18820
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G49300
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT3G18820

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005225 Small GTP-binding protein domain
IPR001806 Small GTPase
Mapman id Description
22.3.4.1.7 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.G-class RAB GTPase