Gene: COL.COLO4_22562

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_22562
  • Transcript Identifier COL.rna21309
  • Gene Type Coding gene
  • Location AWUE01017980.1 : 93450-100717 : positive

Gene Family Information

  • ID HOM05D002169
  • #Genes/#Species 309/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna21309
  • GenBank OMO83389.1
  • id gene22534
  • gene_name COLO4_22562
  • uniprot A0A1R3ILC4

Descriptions

  • Description Ribonuclease II/R
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0004540
IEA
GOA Databaseribonuclease activity
GO:0004540
IEA
InterProribonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000178
IEA
GOA Databaseexosome (RNase complex)

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012340 Nucleic acid-binding, OB-fold
IPR033770 Exosome complex exonuclease RRP44, S1 domain
IPR041505 Dis3-like cold-shock domain 2
IPR029060 PIN-like domain superfamily
IPR033771 Rrp44-like cold shock domain
IPR001900 Ribonuclease II/R
Mapman id Description
16.4.1.2.2 RNA processing.RNA surveillance.exosome complex.associated co-factor activities.exoribonuclease (Dis3/RRP44)