Gene: COL.COLO4_22155
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_22155
- Transcript Identifier COL.rna20903
- Gene Type Coding gene
- Location AWUE01017863.1 : 53089-56537 : negative
Gene Family Information
- ID HOM05D000909
- #Genes/#Species 658/99
- Phylogenetic origin
- ID ORTHO05D000928
- #Genes/#Species 548/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid rna20903
- GenBank OMO84241.1
- id gene22127
- gene_name COLO4_22155
- uniprot A0A1R3INV3
Descriptions
- Description Zinc finger, LIM-type
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT5G17890 |
| GO:0006952 | ISO | PLAZA Integrative Orthology | defense response | AT5G17890 |
| GO:0032875 | ISO | PLAZA Integrative Orthology | regulation of DNA endoreduplication | AT4G36860 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G36860 |
| GO:0043130 | ISO | PLAZA Integrative Orthology | ubiquitin binding | AT4G36860 |
| GO:0008233 | ISO | PLAZA Integrative Orthology | peptidase activity | AT4G36860 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G36860 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.1.6 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin receptor regulatory protein (DA1) |