Gene: COL.COLO4_22054

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_22054
  • Transcript Identifier COL.rna20803
  • Gene Type Coding gene
  • Location AWUE01017846.1 : 111883-113970 : positive

Gene Family Information

  • ID HOM05D000472
  • #Genes/#Species 1118/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna20803
  • GenBank OMO84447.1
  • id gene22026
  • gene_name COLO4_22054
  • uniprot A0A1R3IPF0

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G18280
GO:0009620
ISO
PLAZA Integrative Orthologyresponse to fungus AT2G18280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT2G18280

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G18280
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G18280
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G18280
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT2G18280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000007 Tubby, C-terminal
IPR036047 F-box-like domain superfamily
IPR025659 Tubby-like, C-terminal
IPR001810 F-box domain
Mapman id Description
15.5.21 RNA biosynthesis.transcriptional regulation.transcription factor (TUB)