Gene: COL.COLO4_21820

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_21820
  • Transcript Identifier COL.rna20571
  • Gene Type Coding gene
  • Location AWUE01017791.1 : 210097-212843 : negative

Gene Family Information

  • ID HOM05D002836
  • #Genes/#Species 244/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna20571
  • GenBank OMO84878.1
  • id gene21792
  • gene_name COLO4_21820
  • uniprot A0A1R3IQL5

Descriptions

  • Description Translation initiation factor IF6
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042256
IEA
GOA Databasemature ribosome assembly
GO:0042256
IEA
InterPromature ribosome assembly
GO:0042273
IEA
GOA Databaseribosomal large subunit biogenesis
GO:0006413
IEA
GOA Databasetranslational initiation
GO:0006412
IEA
GOA Databasetranslation
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G55620
GO:0071215
ISO
PLAZA Integrative Orthologycellular response to abscisic acid stimulus AT3G55620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003743
IEA
GOA Databasetranslation initiation factor activity
GO:0043023
IEA
GOA Databaseribosomal large subunit binding
GO:0043022
IEA
GOA Databaseribosome binding
GO:0043022
IEA
InterProribosome binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IEA
GOA Databasenucleolus
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G55620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002769 Translation initiation factor IF6
Mapman id Description
17.1.2.2.3.8 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.ribosome assembly factor (eIF6)