Gene: COL.COLO4_21739

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_21739
  • Transcript Identifier COL.rna20491
  • Gene Type Coding gene
  • Location AWUE01017761.1 : 10293-18932 : positive

Gene Family Information

  • ID HOM05D000844
  • #Genes/#Species 707/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna20491
  • GenBank OMO85142.1
  • id gene21711
  • gene_name COLO4_21739
  • uniprot A0A1R3IRE2

Descriptions

  • Description Aromatic amino acid lyase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016598
ISO
PLAZA Integrative Orthologyprotein arginylation Zm00001eb077230
GO:0046898
ISO
PLAZA Integrative Orthologyresponse to cycloheximide Zm00001eb077230
GO:0009699
ISO
PLAZA Integrative Orthologyphenylpropanoid biosynthetic process Zm00001eb077230
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin Zm00001eb077230
GO:0006559
IEA
GOA DatabaseL-phenylalanine catabolic process
GO:0006559
IEA
InterProL-phenylalanine catabolic process
GO:0009800
IEA
GOA Databasecinnamic acid biosynthetic process
GO:0009698
IEA
GOA Databasephenylpropanoid metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016841
IEA
GOA Databaseammonia-lyase activity
GO:0016841
IEA
InterProammonia-lyase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016829
IEA
GOA Databaselyase activity
GO:0045548
IEA
GOA Databasephenylalanine ammonia-lyase activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003439 ABC transporter-like, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001106 Aromatic amino acid lyase
IPR003593 AAA+ ATPase domain
IPR005922 Phenylalanine ammonia-lyase
IPR023144 Phenylalanine ammonia-lyase, shielding domain superfamily
IPR024083 Fumarase/histidase, N-terminal
IPR008948 L-Aspartase-like
Mapman id Description
9.2.1.1.1 Secondary metabolism.phenolics.p-coumaroyl-CoA biosynthesis.phenylalanine ammonia lyase activity.phenylalanine ammonia lyase (PAL)