Gene: COL.COLO4_20084

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_20084
  • Transcript Identifier COL.rna18845
  • Gene Type Coding gene
  • Location AWUE01016995.1 : 60760-69830 : negative

Gene Family Information

  • ID HOM05D002702
  • #Genes/#Species 254/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna18845
  • GenBank OMO88771.1
  • id gene20056
  • gene_name COLO4_20084
  • uniprot A0A1R3J1R9

Descriptions

  • Description Transcription factor TFIIB
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070897
IEA
GOA Databasetranscription preinitiation complex assembly
GO:0070897
IEA
InterProtranscription preinitiation complex assembly
GO:0006352
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0006383
IEA
GOA Databasetranscription by RNA polymerase III
GO:0006383
IEA
InterProtranscription by RNA polymerase III
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G01280
GO:0055046
ISO
PLAZA Integrative Orthologymicrogametogenesis AT3G09360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000995
IEA
GOA DatabaseRNA polymerase III general transcription initiation factor activity
GO:0000995
IEA
InterProRNA polymerase III general transcription initiation factor activity
GO:0017025
IEA
GOA DatabaseTBP-class protein binding
GO:0017025
IEA
InterProTBP-class protein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000126
IEA
GOA Databasetranscription factor TFIIIB complex
GO:0000126
IEA
InterProtranscription factor TFIIIB complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036915 Cyclin-like superfamily
IPR013763 Cyclin-like
IPR013150 Transcription factor TFIIB, cyclin-like domain
IPR000812 Transcription factor TFIIB
IPR029529 Transcription factor IIIB subunit Brf1
IPR011665 Brf1, TBP-binding domain
Mapman id Description
15.4.3.1 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.component BRF1