Gene: COL.COLO4_19753

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_19753
  • Transcript Identifier COL.rna18516
  • Gene Type Coding gene
  • Location AWUE01016764.1 : 16134-16625 : positive

Gene Family Information

  • ID HOM05D000212
  • #Genes/#Species 1878/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna18516
  • GenBank OMO89452.1
  • id gene19725
  • gene_name COLO4_19753
  • uniprot A0A1R3J3P8

Descriptions

  • Description SKP1 component
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0006511
IEA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0097602
IEA
GOA Databasecullin family protein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016897 S-phase kinase-associated protein 1
IPR036296 SKP1-like, dimerisation domain superfamily
IPR011333 SKP1/BTB/POZ domain superfamily
IPR001232 S-phase kinase-associated protein 1-like
IPR016073 SKP1 component, POZ domain
IPR016072 SKP1 component, dimerisation
Mapman id Description
19.2.2.8.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.target protein binding component SKP1/ASK1