Gene: COL.COLO4_19752

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_19752
  • Transcript Identifier COL.rna18515
  • Gene Type Coding gene
  • Location AWUE01016764.1 : 10227-14207 : positive

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna18515
  • GenBank OMO89451.1
  • id gene19724
  • gene_name COLO4_19752
  • uniprot A0A1R3J3N6

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc10g005520.3
GO:0009561
ISO
PLAZA Integrative Orthologymegagametogenesis AT1G16280
GO:0009791
ISO
PLAZA Integrative Orthologypost-embryonic development AT1G16280
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT1G16280
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT1G16280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003724
IEA
GOA DatabaseRNA helicase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G16280

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G16280
GO:0090406
ISO
PLAZA Integrative Orthologypollen tube AT1G16280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
35.1 not assigned.annotated