Gene: COL.COLO4_18157

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_18157
  • Transcript Identifier COL.rna16920
  • Gene Type Coding gene
  • Location AWUE01016431.1 : 25294-31890 : positive

Gene Family Information

  • ID HOM05D002154
  • #Genes/#Species 311/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna16920
  • GenBank OMO91716.1
  • id gene18129
  • gene_name COLO4_18157
  • uniprot A0A1R3JAA3

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT4G26070
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT4G29810
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT4G29810
GO:0009875
ISO
PLAZA Integrative Orthologypollen-pistil interaction AT4G26070
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT4G26070
GO:0009631
ISO
PLAZA Integrative Orthologycold acclimation AT4G29810
GO:0042542
ISO
PLAZA Integrative Orthologyresponse to hydrogen peroxide AT4G26070
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT4G26070
GO:0006378
IEA
GOA DatabasemRNA polyadenylation
GO:0006378
IEA
InterPromRNA polyadenylation
GO:0098542
ISO
PLAZA Integrative Orthologydefense response to other organism AT4G26070
GO:0060918
ISO
PLAZA Integrative Orthologyauxin transport AT4G29810
GO:0000165
ISO
PLAZA Integrative OrthologyMAPK cascade Solyc12g009020.2
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT4G29810
GO:0002237
ISO
PLAZA Integrative Orthologyresponse to molecule of bacterial origin AT4G26070
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0016310
IEA
GOA Databasephosphorylation
GO:0006468
IEA
GOA Databaseprotein phosphorylation
GO:0006468
IEA
InterProprotein phosphorylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G26070
GO:0004708
ISO
PLAZA Integrative OrthologyMAP kinase kinase activity Solyc12g009020.2
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016301
IEA
GOA Databasekinase activity
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0004672
IEA
GOA Databaseprotein kinase activity
GO:0004672
IEA
InterProprotein kinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G29810
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G29810
GO:0005849
IEA
GOA DatabasemRNA cleavage factor complex
GO:0005849
IEA
InterPromRNA cleavage factor complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000719 Protein kinase domain
IPR011009 Protein kinase-like domain superfamily
IPR015797 NUDIX hydrolase-like domain superfamily
IPR016706 Cleavage/polyadenylation specificity factor subunit 5
Mapman id Description
13.4.4.1.3 Cell cycle organisation.cytokinesis.phragmoplast disassembly.NACK-PQR signalling pathway.MAPK-kinase (NQK/ANQ)
16.3.1.4.1 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Factor I (CF-Im) complex.component CPFS5/CFIm25
18.4.2.1 Protein modification.phosphorylation.STE protein kinase superfamily.protein kinase (MAPKK)