Gene: AT4G00250
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G00250
- Transcript Identifier AT4G00250.1
- Gene Type Coding gene
- Location Chr4 : 112951-113910 : negative
Gene Family Information
- ID HOM05D000538
- #Genes/#Species 1016/97
- Phylogenetic origin
- ID ORTHO05D000614
- #Genes/#Species 740/90
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT4G00250.1
- uniprot O23077
Descriptions
- Description DNA-binding storekeeper protein-related transcriptional regulator
- Computational description DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00238.1); Has 626 Blast hits to 580 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 135; Fungi - 97; Plants - 294; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | TAS | Gene Ontology | regulation of transcription, DNA-templated | 1 |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0010629 | IMP | Gene Ontology | negative regulation of gene expression | 2 |
| GO:0071333 | IMP | Gene Ontology | cellular response to glucose stimulus | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000976 | IDA, IPI | Gene Ontology | transcription cis-regulatory region binding | 2 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IBA | Gene Ontology | nucleus | 4 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT4G00238 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007592 | GLABROUS1 enhancer-binding protein family |
| Mapman id | Description |
|---|---|
| 15.5.28 | RNA biosynthesis.transcriptional regulation.transcription factor (GeBP) |