Gene: COL.COLO4_17394
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_17394
- Transcript Identifier COL.rna16158
- Gene Type Coding gene
- Location AWUE01016338.1 : 5150-9198 : positive
Gene Family Information
- ID HOM05D003546
- #Genes/#Species 193/97
- Phylogenetic origin
- ID ORTHO05D005667
- #Genes/#Species 154/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna16158
- GenBank OMO92666.1
- id gene17366
- gene_name COLO4_17394
- uniprot A0A1R3JCZ0
Descriptions
- Description Ribokinase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016310 | IEA | GOA Database | phosphorylation | |
| GO:0009116 | ISO | PLAZA Integrative Orthology | nucleoside metabolic process | AT1G17160 |
| GO:0006014 | IEA | GOA Database | D-ribose metabolic process | |
| GO:0006014 | IEA | InterPro | D-ribose metabolic process | |
| GO:0019252 | IEA | GOA Database | starch biosynthetic process | |
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0046835 | IEA | GOA Database | carbohydrate phosphorylation | |
| GO:0019303 | IEA | GOA Database | D-ribose catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004747 | IEA | GOA Database | ribokinase activity | |
| GO:0004747 | IEA | InterPro | ribokinase activity | |
| GO:0016301 | IEA | GOA Database | kinase activity | |
| GO:0016301 | IEA | InterPro | kinase activity | |
| GO:0016773 | IEA | GOA Database | phosphotransferase activity, alcohol group as acceptor | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0005524 | IEA | GOA Database | ATP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G17160 |
| GO:0042646 | ISO | PLAZA Integrative Orthology | plastid nucleoid | AT1G17160 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G17160 |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 3.8.1 | Carbohydrate metabolism.ribose metabolism.ribokinase |