Gene: COL.COLO4_16822

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_16822
  • Transcript Identifier COL.rna15586
  • Gene Type Coding gene
  • Location AWUE01016255.1 : 108923-120458 : positive

Gene Family Information

  • ID HOM05D004333
  • #Genes/#Species 165/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna15586
  • GenBank OMO93554.1
  • id gene16794
  • gene_name COLO4_16822
  • uniprot A0A1R3JFF0

Descriptions

  • Description Secretory pathway Sec39
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006890
IEA
GOA Databaseretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006890
IEA
InterProretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006624
ISO
PLAZA Integrative Orthologyvacuolar protein processing AT5G24350
GO:0006888
ISO
PLAZA Integrative Orthologyendoplasmic reticulum to Golgi vesicle-mediated transport AT5G24350
GO:0032527
ISO
PLAZA Integrative Orthologyprotein exit from endoplasmic reticulum AT5G24350
GO:0051604
ISO
PLAZA Integrative Orthologyprotein maturation AT5G24350

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D004333

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IEA
GOA Databaseendoplasmic reticulum

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013244 Sec39 domain
Mapman id Description
22.2.3.2.3 Vesicle trafficking.Golgi-ER retrograde trafficking.vesicle tethering.DSL1 tethering complex.component MIP2