Gene: COL.COLO4_15502

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_15502
  • Transcript Identifier COL.rna14285
  • Gene Type Coding gene
  • Location AWUE01015692.1 : 12370-15563 : negative

Gene Family Information

  • ID HOM05D000184
  • #Genes/#Species 2081/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna14285
  • GenBank OMO96106.1
  • id gene15474
  • gene_name COLO4_15502
  • uniprot A0A1R3JML8

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0055063
ISO
PLAZA Integrative Orthologysulfate ion homeostasis AT4G28610
GO:0071486
ISO
PLAZA Integrative Orthologycellular response to high light intensity AT4G28610
GO:0034765
ISO
PLAZA Integrative Orthologyregulation of ion transmembrane transport AT4G28610
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT2G20400
GO:1903842
ISO
PLAZA Integrative Orthologyresponse to arsenite ion AT4G28610
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT4G28610
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT4G28610

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G29000

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025756 MYB-CC type transcription factor, LHEQLE-containing domain
IPR006447 Myb domain, plants
IPR044848 PHR1-like
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
Mapman id Description
15.5.2.3 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (GARP)
25.3.1.1 Nutrient uptake.phosphorus assimilation.phosphate signalling.transcription factor (PHR1)