Gene: COL.COLO4_15327

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_15327
  • Transcript Identifier COL.rna14110
  • Gene Type Coding gene
  • Location AWUE01015656.1 : 26526-29520 : positive

Gene Family Information

  • ID HOM05D003882
  • #Genes/#Species 179/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna14110
  • GenBank OMO96362.1
  • id gene15299
  • gene_name COLO4_15327
  • uniprot A0A1R3JNA4

Descriptions

  • Description Ubiquitin-conjugating enzyme, E2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016226
IEA
GOA Databaseiron-sulfur cluster assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0016887
ISO
PLAZA Homology (enrichment)ATP hydrolysis activity HOM05D003882
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT5G50960

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G50960

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000608 Ubiquitin-conjugating enzyme E2
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35
Mapman id Description
7.11.3.1.2 Coenzyme metabolism.iron-sulfur cluster assembly machinery.cytosolic CIA system.assembly phase.scaffold protein (NBP35)