Gene: COL.COLO4_15269

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_15269
  • Transcript Identifier COL.rna14052
  • Gene Type Coding gene
  • Location AWUE01015649.1 : 99030-105994 : positive

Gene Family Information

  • ID HOM05D001545
  • #Genes/#Species 413/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna14052
  • GenBank OMO96447.1
  • id gene15241
  • gene_name COLO4_15269
  • uniprot A0A1R3JP06

Descriptions

  • Description Zinc finger, Sec23/Sec24-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0006888
IEA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT3G44340

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030127
IEA
GOA DatabaseCOPII vesicle coat
GO:0030127
IEA
InterProCOPII vesicle coat
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G44340

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006896 Sec23/Sec24, trunk domain
IPR036174 Zinc finger, Sec23/Sec24-type superfamily
IPR006895 Zinc finger, Sec23/Sec24-type
IPR036465 von Willebrand factor A-like domain superfamily
Mapman id Description
22.1.1.1.3.2 Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.component Sec24