Gene: COL.COLO4_14323
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_14323
- Transcript Identifier COL.rna13109
- Gene Type Coding gene
- Location AWUE01015409.1 : 33127-35224 : positive
Gene Family Information
- ID HOM05D000282
- #Genes/#Species 1541/100
- Phylogenetic origin
- ID ORTHO05D000272
- #Genes/#Species 1231/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna13109
- GenBank OMO97855.1
- id gene14295
- gene_name COLO4_14323
- uniprot A0A1R3JSM5
Descriptions
- Description Tubulin
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007010 | IEA | GOA Database | cytoskeleton organization | |
| GO:0007017 | IEA | GOA Database | microtubule-based process | |
| GO:0007017 | IEA | InterPro | microtubule-based process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003924 | IEA | GOA Database | GTPase activity | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0005525 | IEA | GOA Database | GTP binding | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005200 | IEA | GOA Database | structural constituent of cytoskeleton | |
| GO:0005200 | IEA | InterPro | structural constituent of cytoskeleton | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G23860 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G23860 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005856 | IEA | GOA Database | cytoskeleton | |
| GO:0005874 | IEA | GOA Database | microtubule | |
| GO:0005874 | IEA | InterPro | microtubule | |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT5G23860 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003008 | Tubulin/FtsZ, GTPase domain |
| IPR018316 | Tubulin/FtsZ, 2-layer sandwich domain |
| IPR036525 | Tubulin/FtsZ, GTPase domain superfamily |
| IPR023123 | Tubulin, C-terminal |
| IPR002453 | Beta tubulin |
| IPR008280 | Tubulin/FtsZ, C-terminal |
| IPR037103 | Tubulin/FtsZ-like, C-terminal domain |
| IPR000217 | Tubulin |
| Mapman id | Description |
|---|---|
| 20.1.1.2 | Cytoskeleton organisation.microtubular network.alpha-beta-Tubulin heterodimer.component beta-Tubulin |