Gene: COL.COLO4_14147

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_14147
  • Transcript Identifier COL.rna12933
  • Gene Type Coding gene
  • Location AWUE01015381.1 : 50670-55942 : negative

Gene Family Information

  • ID HOM05D001737
  • #Genes/#Species 373/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna12933
  • GenBank OMO98101.1
  • id gene14119
  • gene_name COLO4_14147
  • uniprot A0A1R3JTM4

Descriptions

  • Description Adenylate kinase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009451
ISO
PLAZA Integrative OrthologyRNA modification AT4G25270
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT4G25270
GO:0006221
IEA
GOA Databasepyrimidine nucleotide biosynthetic process
GO:0006221
IEA
InterPropyrimidine nucleotide biosynthetic process
GO:0006207
IEA
GOA Database'de novo' pyrimidine nucleobase biosynthetic process
GO:0006207
IEA
InterPro'de novo' pyrimidine nucleobase biosynthetic process
GO:0006139
IEA
GOA Databasenucleobase-containing compound metabolic process
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process
GO:0046940
IEA
GOA Databasenucleoside monophosphate phosphorylation
GO:0016310
IEA
GOA Databasephosphorylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G25270
GO:0009041
IEA
GOA Databaseuridylate kinase activity
GO:0009041
IEA
InterProuridylate kinase activity
GO:0004127
IEA
GOA Databasecytidylate kinase activity
GO:0004127
IEA
InterProcytidylate kinase activity
GO:0019205
IEA
GOA Databasenucleobase-containing compound kinase activity
GO:0019205
IEA
InterPronucleobase-containing compound kinase activity
GO:0005515
IEA
InterProprotein binding
GO:0016301
IEA
GOA Databasekinase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004017
IEA
GOA Databaseadenylate kinase activity
GO:0033862
IEA
GOA DatabaseUMP kinase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR000850 Adenylate kinase/UMP-CMP kinase
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR006266 UMP-CMP kinase
Mapman id Description
16.11.4.1.5 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.splicing factor (OTP70)
6.2.3.1 Nucleotide metabolism.pyrimidines.phosphotransfers.uridylate kinase