Gene: COL.COLO4_13320
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_13320
- Transcript Identifier COL.rna12107
- Gene Type Coding gene
- Location AWUE01015149.1 : 248374-250471 : positive
Gene Family Information
- ID HOM05D002058
- #Genes/#Species 323/100
- Phylogenetic origin
- ID ORTHO05D009216
- #Genes/#Species 107/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna12107
- GenBank OMO99413.1
- id gene13292
- gene_name COLO4_13320
- uniprot A0A1R3JX40
Descriptions
- Description Shikimate kinase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016310 | IEA | GOA Database | phosphorylation | |
| GO:0010027 | ISO | PLAZA Integrative Orthology | thylakoid membrane organization | AT3G26900 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT3G26900 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016301 | IEA | GOA Database | kinase activity | |
| GO:0004765 | ISO | PLAZA Integrative Orthology | shikimate kinase activity | AT3G26900 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G26900 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G26900 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 4.1.5.1.4 | Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.shikimate kinase |