Gene: AT3G26900

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G26900
  • Transcript Identifier AT3G26900.2
  • Gene Type Coding gene
  • Location Chr3 : 9912314-9914424 : negative

Gene Family Information

  • ID HOM05D002058
  • #Genes/#Species 323/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G26900.2
  • symbol SKL1
  • Alias ATSKL1,Arabidopsis thaliana shikimate kinase-like 1
  • full_name shikimate kinase-like 1
  • uniprot Q9LW20

Descriptions

  • Description shikimate kinase like 1
  • Computational description shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 3815 Blast hits to 3815 proteins in 1373 species: Archae - 6; Bacteria - 2903; Metazoa - 33; Fungi - 1; Plants - 140; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink).
  • Computational description shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009658
IMP
Gene Ontologychloroplast organization1
GO:0010027
IMP
Gene Ontologythylakoid membrane organization1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004765
IDA
Gene Ontologyshikimate kinase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM, IBA
Gene Ontologychloroplast2 3
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma4
GO:0005829
HDA
Gene Ontologycytosol5
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000623 Shikimate kinase/Threonine synthase-like 1
IPR031322 Shikimate kinase/gluconokinase
Mapman id Description
4.1.5.1.4 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.shikimate kinase