Gene: COL.COLO4_12684
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_12684
- Transcript Identifier COL.rna11473
- Gene Type Coding gene
- Location AWUE01014939.1 : 94507-98506 : positive
Gene Family Information
- ID HOM05D000446
- #Genes/#Species 1165/97
- Phylogenetic origin
- ID ORTHO05D000321
- #Genes/#Species 1120/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna11473
- GenBank OMP00445.1
- id gene12656
- gene_name COLO4_12684
- uniprot A0A1R3K012
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008152 | IEA | GOA Database | metabolic process | |
| GO:0045493 | IEA | GOA Database | xylan catabolic process | |
| GO:0045493 | IEA | InterPro | xylan catabolic process | |
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0009044 | IEA | GOA Database | xylan 1,4-beta-xylosidase activity | |
| GO:0009044 | IEA | InterPro | xylan 1,4-beta-xylosidase activity | |
| GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006598 | Glycosyl transferase CAP10 domain |
| IPR036962 | Glycoside hydrolase, family 3, N-terminal domain superfamily |
| IPR013783 | Immunoglobulin-like fold |
| IPR036881 | Glycoside hydrolase family 3 C-terminal domain superfamily |
| IPR044993 | Beta-D-xylosidase |
| IPR026891 | Fibronectin type III-like domain |
| IPR002772 | Glycoside hydrolase family 3 C-terminal domain |
| IPR017853 | Glycoside hydrolase superfamily |
| Mapman id | Description |
|---|---|
| 50.3.2 | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase |