Gene: COL.COLO4_09973

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_09973
  • Transcript Identifier COL.rna8768
  • Gene Type Coding gene
  • Location AWUE01014319.1 : 1868-14463 : positive

Gene Family Information

  • ID HOM05D004186
  • #Genes/#Species 169/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna8768
  • GenBank OMP04066.1
  • id gene9945
  • gene_name COLO4_09973
  • uniprot A0A1R3KAH3

Descriptions

  • Description Barwin
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0050832
IEA
GOA Databasedefense response to fungus
GO:0050832
IEA
InterProdefense response to fungus
GO:0042742
IEA
GOA Databasedefense response to bacterium
GO:0042742
IEA
InterProdefense response to bacterium
GO:0042732
IEA
GOA DatabaseD-xylose metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009045
IEA
GOA Databasexylose isomerase activity
GO:0009045
IEA
InterProxylose isomerase activity
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G57655
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G57655
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT5G57655
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT5G57655
GO:0044599
IEA
GOA DatabaseAP-5 adaptor complex
GO:0044599
IEA
InterProAP-5 adaptor complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013452 Xylose isomerase, bacterial-type
IPR001153 Barwin domain
IPR001998 Xylose isomerase
IPR036908 RlpA-like domain superfamily
IPR016024 Armadillo-type fold
IPR028222 AP-5 complex subunit zeta-1
IPR036237 Xylose isomerase-like superfamily
Mapman id Description
22.3.1.6.1 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-5 cargo adaptor complex.large subunit zeta (AP5Z)